PSF Size Image Smoothing
CIAO 4.16 Science Threads
Overview
Synopsis:
The Chandra Point Spread Function varies considerably across the field of view, from nearly a single pixel on-axis to several hundred pixels at off-axis angles > 10'. It can be tricky to smooth the image such that each pixel is smoothed by something that represents the same intrinsic PSF size at each point.
In this thread we show one technique that allows an image to be smoothed such that each pixel is smoothed at the same scale as the PSF.
Purpose:
This thread shows how to smooth an image such that each pixel is smoothed at the size of the PSF.
Related Links:
- mkpsfmap ahelp file
- dmimgadapt ahelp file
- Proposer's Guide information on Point-Spread-Function and Encircled Energy Fraction.
- Calibration information on REEF files.
Last Update: 15 Feb 2022 - Review for CIAO 4.14. Updated for Repro5.
Contents
- Getting Started
- Determine the Size of the PSF
- Truncate Values
- Adaptive Smooth
- Summary
- History
- Images
Getting Started
Download the sample data: 635 (Rho Oph)
unix% download_chandra_obsid 635 evt2,fov
To begin we will bin the event file into an image. Here we filter the event list on energy in the 0.5 to 7.0 keV range, and apply a region filter in the form of the field of view file. The FOV filter allows the tool to know the active area of the image space and when it is then binned, the image, Figure 1, is made such that it just encloses the FOV rather than the full 8k x 8k image space.
unix% dmcopy "acisf00635N005_evt2.fits.gz[energy=500:7000,sky=region(acisf00635_000N005_fov1.fits.gz)][bin sky=2]" img.fits clob+ unix% dmlist img.fits cols -------------------------------------------------------------------------------- Columns for Image Block EVENTS_IMAGE -------------------------------------------------------------------------------- ColNo Name Unit Type Range 1 EVENTS_IMAGE[1779,1470] Int2(1779x1470) - -------------------------------------------------------------------------------- Physical Axis Transforms for Image Block EVENTS_IMAGE -------------------------------------------------------------------------------- Group# Axis# 1 1,2 sky(x) = (+2799.2220) +(+2.0)* ((#1)-(+0.50)) (y) (+2887.9247) (+2.0) ((#2) (+0.50)) -------------------------------------------------------------------------------- World Coordinate Axis Transforms for Image Block EVENTS_IMAGE -------------------------------------------------------------------------------- Group# Axis# 1 1,2 EQPOS(RA ) = (+246.8259)[deg] +TAN[(-0.000136667)* (sky(x)-(+4096.50))] (DEC) (-24.5739 ) (+0.000136667) ( (y) (+4096.50))
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Figure 1: Image of Rho Oph Field
Determine the Size of the PSF
To smooth at the same size as the PSF, first we need to know what that is. The mkpsfmap tool can be used to do just this. We do however need to decide on two parameters. What energy? What PSF fraction?
The size of the PSF varies with energy, though less than it does by off-axis-angle. We should choose an energy that is appropriate for the energy of the events in the image. For this example we choose an energy of 2.3keV which is the same energy chosen by the Chandra Source Catalog for this energy band ("broad").
The second question will depend on your specific task. What fraction of the PSF are you expecting to include? To include 100% of the PSF would require an infinite smoothing radius. For this exercise we choose a PSF size of 90%; that is it is expected that 90% of the PSF would fall within a circle with this radius.
unix% mkpsfmap infile=img.fits outfile=psfmap.fits energy=2.3 ecf=0.9 units=logical
It is important here to note that we chose units=logical. This tells mkpsfmap to compute the size of the PSF in unit of pixel as the image is currently binned (in this example by 2).
The output image looks like Figure 2
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Figure 2: A map of the PSF size
Truncate Values
For the next step we require a reasonably finite number of smoothing scales. The output of mkpsfmap though is continuous and if used as is, it would exhaust all system resources. Therefore before we proceed we will truncate the values. We can truncate at any reasonable precision so we will choose to truncate at the 1st decimal point using dmimgcalc. We also apply a threshold, any values that are less than 0.1 pixels are reset to be 0.1. This ensure that all pixels will have some smoothing applied.
unix% dmimgcalc psfmap.fits none trunk_psf.fits op="imgout=((int)(img1*10.0))/10.0" unix% dmimgthresh trunk_psf.fits tt_psf.fits cut=0.1 value=0.1
By eye, the image looks very similar to Figure 2, with the exception that values outside the FOV are now set to 0.1 instead of being NaN.
Adaptive Smooth
We are now ready to smooth the original image. For this exercise we will smooth with a cone whose base radius is equal to the PSF size. To do this we use the dmimgadapt tool.
unix% dmimgadapt infile=img.fits outfile=sm_img.fits function=cone \ inradfile=tt_psf.fits mode=h clob+ verbose=3 Pre-computing convolution kernels First iteration: determine scales and normalization Percent complete: 99.93% Second iteration: computing final normalized values
With this size image and the number of scales, this will take a few minutes to run. We could also use a gaussian instead of a cone but it will take roughly 15min (depending on hardware) since the Gaussian has greater extent. With verbose=3 the percent complete is updated with each row. The output is shown in Figure 3.
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Figure 3: Image smoothed at size of PSF
The output image also has NaNs for the data points outside the original FOV filter.
Summary
This kind of image can be used to diagnose whether structure seen in an off-axis source is instrumental (PSF) or astrophysical. Since convolution and correlation are related, it can also be used as the starting point for a source detection method (for example by looking for local maximums in the output with the dmimgfilt tool.
History
29 Jan 2013 | Initial version. |
11 Dec 2013 | Review for CIAO 4.6; no changes. |
23 Dec 2014 | Review for CIAO 4.7; updated See Also links. |
15 Feb 2022 | Review for CIAO 4.14. Updated for Repro5. |